Arabidopsis thaliana
seed snRNA-seq explorer
Check out our paper for more details:
Martin et al. 2025
Select A. thal dataset:
DAP3
DAP5
DAP7
ATLAS
Input gene IDs for genes plot:
Select an annotation resolution:
Select dataset first
Select a feature for the metadata plot:
Sample ID
Timepoint
Transcripts/nucleus
Genes/nucleus
% Chloroplast
% Mitochondrial
% Cell Cycle
Cell Cycle Phase
Select a cluster for filtering the DE genes table:
Select dataset first
Select plotting style
UMAP
Violin
Dotplot
3 DAP
5 DAP
7 DAP
Annotations
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Genes
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Metadata
Differential expression table. All values generated in a cluster vs. all comparison
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